Code for preparing functional MRI data as organs at risk

Code for analyzing functional MRI data, to generate brain activity maps, to be included as organs at risk in radiosurgery / radiotherapy treatment planning

https://github.com/DavidAbramian/CENIIT2

Described in the paper

Abramian, D., Blystad, I., & Eklund, A. (2023). Evaluation of inverse treatment planning for gamma knife radiosurgery using fMRI brain activation maps as organs at risk. Medical Physics, 50(9), 5297-5311

Transforms functional MRI data into RTSTRUCT DICOM files for import of brain activity based organs at risk to radiosurgery / radiotherapy softwares

Need fMRI data and an anatomical volume for each patient

Researchers and companies working with radiotherapy and radiosurgery

None